Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905989.1_cds_XP_016456259.1_50112
CDS Infomation

[gene=LOC107780240] [db_xref=GeneID:107780240] [protein=laccase-3-like] [protein_id=XP_016456259.1] [location=join(45316..45441,45660..45811,45900..46144,46343..46471,46919..47863,47956..48086)] [gbkey=CDS]
Sequence

ATGAAGACTTATAGTAATTTTTTTCTCAAGAAACCACTATTCAATGGCCTCTTGGCAACC
ATTATAGCTATACTATCTCTACTGCCTTCTTTTGCAAATGCAGAATTTCACTACCATGAA
TTTATTGTTCAAGAAACCAGAATAACAAGGCTATGCAGAACCAAGAATATAATTACAGTG
AATGGACAATTTCCAGGACCAACTTTGACAGTTCGAAACGGGGATACACTATTTGTTACT
GTCGTTAATAGAGCTCGTTACAACGTTACAATCCATTGGCATGGAATTCGTCAAATGCGG
ACGCCATGGGCTGATGGGCCTGAGTATGTAACACAATGTCCAATAAGACCAGGAGGATTT
TACACATACAGATTCACTATTGAAAACCAAGAGGGTACATTGTGGTGGCATGCACACAGC
AAATGGCTTAGAGCTACTGTTTATGGAGCTTTAGTTATCTTACCAAAACAGGGTTCTAAT
TTTCCTTTTTTACAGCCCCAGAAAGATATCCCTATTCTTCTCGGGGAATGGTGGAACAGA
GACATTATTGCAGTACAAAGACAAGCACAATTCACTGGAGCAGCTCCTAATAATTCTGAT
GCATATACTATTAATGGTCAACCTGGTGACCTTTACAGATGCTCTAGCCAAGGTACTGTG
AAAGTTTCAGTAAACCCTGGAGAAACTGTTCTACTGAGGGTAATCAATGCTGCACTCAAT
CAACAACTTTTCTTCTCAGTTGCAAACCACATGCTCACAGTTGTAGGTGTTGATGCTACT
TACAACAAGCCTTTTACAACCAATGTTATTATGGTTGGACCTGGCCAAACAACCAATGTA
ATCCTCACTGCTAATCGTCCCCCTGGCCGCTACTATATGGCAGCTAGCGCCTATGCCACT
GCCAGAAACGCGCAATTTGACAACACCACTACCACTGCTATCCTTGAGTACACAAATCTC
GTGTCGGTGGCCAATTCAAGACCTTCATTGCCTCAACTTCCAGCTTTCAACGATACAGCT
ACTGCGACTGCTTTCACTAGCCAATTGAGGAGCATTCCTAGTAACAATGTTAGAGTTCCC
AATCAGATTGATGAGAACTTGTTTTTCACTGTTGGACTTGGCTTAGTGAATTGCGCTCCT
GGTCCTAGATGTCAAGGTCCTAATAATACGCGGTTTGCTGCTAGCATGAATAATATTTCA
TTTGTTCTTCCTAGAAGAACTTCATTGCTCCAGGCATATTACCAAAACATTCCAGGGATT
TACACATTGGATTTTCCTCCTGTTCCACCTGTGCAATTTGATTACACGGGCAATGTTTCT
CGAGGACTTTGGCAACCAAGATTTGGAACTAAGTTGCACAAGATCAAGTTTGGTTCTACT
GTACAAATTGTATTGCAGGATACTGCTATCTTTTCGACAGAGGACCATCCTATACATCTT
CATGGATACCATTTTTGGGTCGTTGGACAAGGTTTTGGTAACTTCAATCCTCAGACTGAT
ACTGCTACATTTAACCTAGTTGATCCGCCTGTCAGGAACACAATTGATGTGCCTGTTGGT
GGATGGGCAGTCATTCGTTTCGTGGCAGATAATCCAGGGGTTTGGCTATTTCATTGCCAC
ATTGATTCTCATTTGGCTTGGGGGCTAGGGATGGCGTTCATCGTCGAGAATGGAATAGGA
GAGAAACAGACTATGGAGCCACCTCCACCAGATCTACCACAATGCTAA

Peptide Sequence

PEP ID

XP_016456259.1
PEP Infomation

PREDICTED: laccase-3-like [Nicotiana tabacum]
Sequence

MKTYSNFFLKKPLFNGLLATIIAILSLLPSFANAEFHYHEFIVQETRITRLCRTKNIITV
NGQFPGPTLTVRNGDTLFVTVVNRARYNVTIHWHGIRQMRTPWADGPEYVTQCPIRPGGF
YTYRFTIENQEGTLWWHAHSKWLRATVYGALVILPKQGSNFPFLQPQKDIPILLGEWWNR
DIIAVQRQAQFTGAAPNNSDAYTINGQPGDLYRCSSQGTVKVSVNPGETVLLRVINAALN
QQLFFSVANHMLTVVGVDATYNKPFTTNVIMVGPGQTTNVILTANRPPGRYYMAASAYAT
ARNAQFDNTTTTAILEYTNLVSVANSRPSLPQLPAFNDTATATAFTSQLRSIPSNNVRVP
NQIDENLFFTVGLGLVNCAPGPRCQGPNNTRFAASMNNISFVLPRRTSLLQAYYQNIPGI
YTLDFPPVPPVQFDYTGNVSRGLWQPRFGTKLHKIKFGSTVQIVLQDTAIFSTEDHPIHL
HGYHFWVVGQGFGNFNPQTDTATFNLVDPPVRNTIDVPVGGWAVIRFVADNPGVWLFHCH
IDSHLAWGLGMAFIVENGIGEKQTMEPPPPDLPQC

Transcript Sequence

Gene sequence data has not been registered.